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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816499.1_cds_XP_016498830.1_12812
CDS Infomation

[gene=LOC107817497] [db_xref=GeneID:107817497] [protein=short-chain dehydrogenase TIC 32, chloroplastic-like] [protein_id=XP_016498830.1] [location=complement(join(2859..3041,3247..3293,3377..3464,4042..4120,4247..4400,4735..4814,5086..5317,6848..7064))] [gbkey=CDS]
Sequence

ATGGACTTGGATAAGTTTCATAGAGCTTTTATATATACGTGGTTTTCAACTATAGCTGCA
ATCTTGCAGTTCAAAATTCCAAGCTTTGCTCTAATGAAGGCTGCTCTCAAATATTTGGTA
GGCATTGCTGGCCCAAGTGGCTTTGGCTCTAAATCTACTGCTGACCAAGTCACTCAACAT
TCATCTATCAATTCTCAGCTCACCGCAATTATCACTGGCGCAACATCAGGGATAGGGGCA
GAAACAGCAAGAGTACTGGCAAAAAGGGGTGTAAGGATAGTAATCCCAGCAAGAGACTTA
AAGAAAGCAGCAATTGTGAAGGAATCCATACAAAAAGAGAGTCCAATGGCTGAGATTATA
TTATTAGAGATAGACTTGAGTTCATTTGCTTCCATTCAGAGATTTTGTGCTCAGTTCTTG
TCTTTAGGGCTGCCCCTTCACATTCTCATAAATAATGCAGGGAAATTTTCGCAGAAACTG
GAGTTCTCTGAAGACAAAATCGAGATGACTTTTGCCACAAACTACTTAGGTCATTTTCTA
TTGACAGAGTTGCTATTAGAGAAAATGGTTGAGACAGCAGAAGCCACAGGGATTCAAGGA
AGAATAGTGAATGTTACTTCAGTAGTTCACAACTGGGTGAAAAGAGATCAATTCCGCTTC
TGCAAATTGCTCAATCCAAAGAATTATAATGGTACTCGTGCATATGCTCAGTCAAAATTG
GCCAACATATTACATGCCAAGGAATTGTCAAGACAACTAAAGGCAAGAAATGCAAATGTG
GCTATCAATGCAGTCCATCCTGGAATTGTAAAGACTGGAATAATCAGAGATCACAAGGGC
TTTATCACAGATTCTCTCTATTTTATGGCATCGAAGCTTCTAAAGTCAACATCACAGGGT
GCAGCAACCACATGCTATGTAGCACTGAGCCCACAAACAGAAGGGATAAGTGGGAAATAC
TTTGCAGACTGCAATGAAAGTCACTGTTCAGTTTTAGCAAATGATGAAACTGAAGCTCTT
AAGCTTTGGAAGGGTACTCGTGTTCTCATCCATAGAAGATTGCTTCCACCTGTAGGATGA

Peptide Sequence

PEP ID

XP_016498830.1
PEP Infomation

PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Nicotiana tabacum]
Sequence

MDLDKFHRAFIYTWFSTIAAILQFKIPSFALMKAALKYLVGIAGPSGFGSKSTADQVTQH
SSINSQLTAIITGATSGIGAETARVLAKRGVRIVIPARDLKKAAIVKESIQKESPMAEII
LLEIDLSSFASIQRFCAQFLSLGLPLHILINNAGKFSQKLEFSEDKIEMTFATNYLGHFL
LTELLLEKMVETAEATGIQGRIVNVTSVVHNWVKRDQFRFCKLLNPKNYNGTRAYAQSKL
ANILHAKELSRQLKARNANVAINAVHPGIVKTGIIRDHKGFITDSLYFMASKLLKSTSQG
AATTCYVALSPQTEGISGKYFADCNESHCSVLANDETEALKLWKGTRVLIHRRLLPPVG

Transcript Sequence

Gene sequence data has not been registered.